My two cents on improvement
First up, as Com I would like to resize my mini map, I don't need the largest field of view possible. I would however like to keep a better eye on what is going on in my map. I think it is way too small for Com'ing.
Second, I would like the nano stuff show up when I select players. This would save some clicks and headaches. Plus, I don't see the point in having movement commands (the basic ones, not the spiffy harass, attack, etc) when I just have to right click to do the same thing.
Third, I would like to see a large ish icon pop up somewhere when research on something is complete that I could click on if I wanted to or let sit there until I click on it. At times I have 3-4 things researching and I don't want to have to look around to figure out which one it was.
Fourth, I'm sure you're working on this but changing the looks of the two different nano's would make it easier to explain to new Com's which one is which.
"Force has no place where there is need of skill" - Herodotus